PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928191.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 248aa MW: 28651.9 Da PI: 9.9673

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928191.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.1	3.7e-45	32	158	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+ +yLk+ v+gkkl++ + i ++++y ++Pw+Lp +k++e+ewyfF++rd++ g r+nr+tk+gyWkatg+d+++++ XP_022928191.1 32 PGFRFHPTEEELLEFYLKHVVSGKKLQF-DPIGTLNLYLHDPWELPGLAKNGEREWYFFVPRDRRLGGGGRPNRTTKNGYWKATGSDRKIVRLld 125 9************************9.99***********8889999*********************************99887 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++lvgl+ktLvfy gra++g ktdW+m+eyr+ XP_022928191.1 126 PKRLVGLRKTLVFYLGRASRGIKTDWIMNEYRF 158 8889*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MALFIPPQKK TLTRSVPVRT LSHEMAQEAD LPGFRFHPTE EELLEFYLKH VVSGKKLQFD 60 PIGTLNLYLH DPWELPGLAK NGEREWYFFV PRDRRLGGGG RPNRTTKNGY WKATGSDRKI 120 VRLLDPKRLV GLRKTLVFYL GRASRGIKTD WIMNEYRFSD NSPLSKDMVL CKIYRKATSL 180 KVLEQRAAME EEDARLFQAS LQIPSELNNL TEPQVPNLNM DWSQDLLWSQ SSSPWLQTLT 240 PSASLLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	4e-81	NAC family protein