PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928214.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 294aa MW: 31069.7 Da PI: 9.1141

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928214.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.5	1.2e-38	47	158	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a++ s+s++ s + XP_022928214.1 47 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAVAGSVSQQGVSLSaglqqkle 141 789******************************************************************99977777777764444433333333 PP TCP 89 ......kaaksaakskksqksaasalnlak 112 + s as nl + XP_022928214.1 142 elggggS-------------SRASWGNLGR 158 3333330.............2222333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MDPKTSSSTT KQPQELVPNF LNFPQEQSIM GENKPPEIKE EGKKQLAPKR SSNKDRHTKV 60 EGRGRRIRMP ALCAARIFQL TRELGHKSDG ETIQWLLQQA EPSIIAATGT GTIPASALAA 120 VAGSVSQQGV SLSAGLQQKL EELGGGGSSR ASWGNLGRPH LAAAAAAAAA AATATAVWPS 180 SVSGFGFQSS TTAGVAQSAT NLANETSNYF HKLGFPAFDL PPTNMGPMSF TSILGANSQQ 240 LPGLELGLSQ DPHIGAINPQ ALNQFYQQMG QARVHHHHQQ HQQPPAKDDS QDSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	7e-67	TCP family protein