PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928228.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 193aa MW: 22476.4 Da PI: 9.3372

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928228.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.1e-15	11	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W++ a g++R +k+c++rw++yl XP_022928228.1 11 KGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYL 58 79****************************9***********97 PP
2	Myb_DNA-binding	52	1.6e-16	64	107	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+ ++++++G++ W++Ia++++ gRt++++k++w++ XP_022928228.1 64 RGNITSDEQLLIMELHAKWGNK-WSKIAKHLP-GRTDNEIKNYWRT 107 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MDAEGVVEVR KGPWTMEEDL ILINYIANHG EGVWNSLALS AGLKRNGKSC RLRWLNYLHP 60 NVRRGNITSD EQLLIMELHA KWGNKWSKIA KHLPGRTDNE IKNYWRTRIQ KHVKQGHRFN 120 ARQTSSKATS RDRNQVNEEA PSSYTMDPIM ETFSPPNYTK NLDAFSLPLL PVDHSNQNYW 180 SMEDLWSMQL LNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	3e-82	MYB family protein