PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022928513.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 248aa    MW: 27723.4 Da    PI: 9.544
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022928513.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1011.7e-31161351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+G+rF Ptdeelv +yLk+k+ + +l++ +vi+++d++ ++P+ +p  +   +++ +fFsk+++        +r t  g+Wk+tgk+k ++++
  XP_022928513.1  16 LPVGYRFCPTDEELVEHYLKRKAFDLPLPA-SVIPDFDVFLTDPSAFPGDF---KEKRFFFSKQRS------LLRRNTGCGIWKSTGKEKLIVNQ 100
                     799***************************.99***************554...346788888765......457999****************8 PP

             NAM  96 .kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                       +++vgl+k+Lvfy+   ++++  t+Wvmheyrl
  XP_022928513.1 101 gINKVVGLRKSLVFYESkVSERTATTRWVMHEYRL 135
                     65678**********76256677899*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEKTSNFVIN GGMMRLPVGY RFCPTDEELV EHYLKRKAFD LPLPASVIPD FDVFLTDPSA  60
FPGDFKEKRF FFSKQRSLLR RNTGCGIWKS TGKEKLIVNQ GINKVVGLRK SLVFYESKVS  120
ERTATTRWVM HEYRLPRSGS VSATTTPNST QLEMEDWAVY SLFQKRRRPK KKEGRKVAQG  180
SVMGLLRVEE NGGEFSQPCS SCSSGVTQVS SNGTESTDQE ESSSDLGLGL GLGLGFSSSY  240
YEAHVRGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164171QKRRRPKK
2165176KRRRPKKKEGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.19e-40NAC family protein