PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022928596.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 234aa    MW: 26845.2 Da    PI: 9.5491
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022928596.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.72.5e-30139196158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e  +k++  ++kpylheSRh hA+rR+Rg+ GrF
  XP_022928596.1 139 EEPVYVNAKQYHGILRRRQSRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRF 196
                     69*******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MMSSKTDYRY HPDGYNFQPS WWLGAPTTIA ISKEDKVNWV WPNGLVDNGP QPNRSTKEVQ  60
ETMTPPPYGE SIVARQSKDA SIVLPLMNNE HYHASTYETT ATSYQYNDVY YGQLMPPFGF  120
QTLHNSEYTR MTLPLAMAEE PVYVNAKQYH GILRRRQSRA KAEVLNKISR SQKKPYLHES  180
RHLHAMRRER GCRGRFVSKK KTVEPIASMA DDGKGSNMSS NCYQGSELHL SAYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-32NF-YA family protein