PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022928625.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 239aa    MW: 27525.1 Da    PI: 9.8696
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022928625.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.91.1e-35361272102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y+++ed++++++isw+++g++fvv+++ efak+vLpk Fkh nf+SFvRQLn+YgF+kv++++         weF +++F+kg+ke+l++
  XP_022928625.1  36 FLVKTYTVVEDPATDKVISWNSEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTR---------WEFCNDKFRKGEKEKLCE 121
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_022928625.1 122 IRRRKA 127
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEAGVSNNNG DQKGLRLPSP PRTVESMMKK STPPPFLVKT YTVVEDPATD KVISWNSEGT  60
AFVVWQTAEF AKDVLPKLFK HCNFSSFVRQ LNTYGFRKVT TTRWEFCNDK FRKGEKEKLC  120
EIRRRKAWTN KQQHEVQHEV DEDQRSSSSN SSSSQYNTLM DENKRLKKEN GALSSELASM  180
KGKCRELLDL VAKYGNGSRK EDEDERPKLF GVRLEVEGER RRKTKRAEET AFLPSQSCK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220225RRRKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.11e-64HSF family protein