PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928710.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 376aa MW: 42117.1 Da PI: 6.5935

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928710.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.6e-32	212	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fv++v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ XP_022928710.1 212 KTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI 266 68****************************************************7 PP
2	Myb_DNA-binding	50.2	5.9e-16	216	265	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++vd+v++lGg t+k+I + m +g+t ++ks++qky+ XP_022928710.1 216 RWTQDLHEKFVDCVNRLGGAekaTPKAILKLMDsEGLTIFHVKSHLQKYR 265 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MNDYGIDSKQ EIHQNHGVIV DCCSQNTRAQ QPWRMGACVH LSAMDEVESL EQQNLGLSNS 60 SSTIINLFES PASAFFSTEQ CMGLPPIEFR TGSSSFDRAS DSAEHSGADS EFSNTLQSVV 120 RSQLCKRSFN GLPKTIFTDY KVFDARPPSI GKHFSVPFKD QGGCYDSTSY SIAQPSFCSS 180 QEKNSPRFSC LSSSVGSGSS SSSFNGNGFP TKTRIRWTQD LHEKFVDCVN RLGGAEKATP 240 KAILKLMDSE GLTIFHVKSH LQKYRIAKYM PESADRKSDR RNDMNEVAEL DVKTAMQIKD 300 ALQLQLDVQR RLHDQLEIQR KLQLQIEEQG KRLKIMFDQQ QETNKCFFTA NGFNKPFPND 360 PSGYLDDPPI PTAENI

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MNDYGIDSKQ EIHQNHGVIV DCCSQNTRAQ QPWRMGACVH LSAMDEVESL EQQNLGLSNS  60
SSTIINLFES PASAFFSTEQ CMGLPPIEFR TGSSSFDRAS DSAEHSGADS EFSNTLQSVV  120
RSQLCKRSFN GLPKTIFTDY KVFDARPPSI GKHFSVPFKD QGGCYDSTSY SIAQPSFCSS  180
QEKNSPRFSC LSSSVGSGSS SSSFNGNGFP TKTRIRWTQD LHEKFVDCVN RLGGAEKATP  240
KAILKLMDSE GLTIFHVKSH LQKYRIAKYM PESADRKSDR RNDMNEVAEL DVKTAMQIKD  300
ALQLQLDVQR RLHDQLEIQR KLQLQIEEQG KRLKIMFDQQ QETNKCFFTA NGFNKPFPND  360
PSGYLDDPPI PTAENI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	3e-67	G2-like family protein