PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928784.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 236aa MW: 26449.7 Da PI: 6.9949

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928784.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.7e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l + +G+ +W+++++ g++R++k+c++rw +yl XP_022928784.1 14 KGPWTAEEDNKLFTFILSYGPCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.1	1.3e-15	72	111	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++l +d++++lG++ W++Ia+ ++ gRt++++k++w+++ XP_022928784.1 72 EAEEQLVIDLHARLGNR-WSKIAAGLP-GRTDNEIKNHWNTH 111 67*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDNKLFTFIL SYGPCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL DEAEEQLVID LHARLGNRWS KIAAGLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPVTHQPLQ KPQTESSSQG SSTDSSSAAI SPLSEPNFPA KDQPLTSQIW MEALQDDSWS 180 NFSTWGSESY TDFGPHSSED SLNQLLDYYK DLGDKDCELG SSGNFNKQLA GMGEKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	4e-83	MYB family protein