PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928828.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 278aa MW: 31439.8 Da PI: 9.8209

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928828.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	143.3	1.9e-44	105	231	2	131
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssgkaak 92 +gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWLl ++ aik+l++++++s s+c+ +s+++s++ + XP_022928828.1 105 TGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNNNNNSGvshgSACSGSSEVVSKQ-------DA 192 79************************************************************5555533336665555555544.......33 PP TCP 93 saakskksqksaasalnlakesrakarararertrekmr 131 + +++k+ + + + +esra+arararert k++ XP_022928828.1 193 GGSIGTPKHKKGRQLQTIGRESRARARARARERTMLKKS 231 34456666666666678888************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MDQQHEENSS YLHFPHPFLD DDDLFLTHFL SQQQEQQQQQ LVSGGDCWKE QDEEQEQDKA 60 DDVGHDHKQN SEKKGRRSLE VKKKKKKGSS SNSNRKNGSS TTKRTGKKDR HSKICTAQGP 120 RDRRMRLSLQ IARKFFDLQD MLGFDKASKT IEWLLSHSNS AIKALNNNNN NSGVSHGSAC 180 SGSSEVVSKQ DAGGSIGTPK HKKGRQLQTI GRESRARARA RARERTMLKK SPQPICISQH 240 YLNSDETHLE DCPKVFAFSD DLSSIHTFFS GNITTFLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	225	RARARARARER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-30	TCP family protein