PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022928894.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 239aa    MW: 27096.5 Da    PI: 10.0432
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022928894.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.93.3e-35141471128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr..atksgyWka..tgkdk 90 
                     lppGfrF+Pt+eelv eyLk kv +  l++ ++i+ev++++++Pw+ p    + e++ +y F++++++   gk++ r   t sgyWka  +g+++
  XP_022928894.1  14 LPPGFRFQPTEEELVFEYLKCKVFSCALPA-SIIPEVNVCHFDPWEVPgGDWEVEQRCTYLFINKEET---GKKNGRwvWTPSGYWKAkpKGRER 104
                     79***************************9.89***************66777777888***998774...56666654589****962268899 PP

             NAM  91 evlsk....kgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     +++s+    ++  vg+kktLvfy ++r++ g++t Wvmh+yrl
  XP_022928894.1 105 RIVSSssssQSVSVGMKKTLVFYaNNRNRGGSRTGWVMHQYRL 147
                     9999877666666**********54588899**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDKLKFGRDG MRGLPPGFRF QPTEEELVFE YLKCKVFSCA LPASIIPEVN VCHFDPWEVP  60
GGDWEVEQRC TYLFINKEET GKKNGRWVWT PSGYWKAKPK GRERRIVSSS SSSQSVSVGM  120
KKTLVFYANN RNRGGSRTGW VMHQYRLIAT HPKTHTPTVL NNMNKWAICR IFWRKLQSNR  180
YNHHLQLQYY SMSTNHSDGN ASASAASPAP STTSSSSSTS TSFFASSVQQ KSDDDFSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-39NAC family protein