PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022928999.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 316aa    MW: 35410.5 Da    PI: 6.6794
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022928999.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B397.11.1e-3054156197
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f kv tpsdv+k++rlv+pk++ae++    ++ + ++  l +ed++g+sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022928999.1  54 FNKVVTPSDVGKLNRLVIPKQHAERFfpldSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFQRGvGEiGR 148
                     89***************************9555568889************************************************55466666 PP

                     E..EEEEE CS
              B3  90 felvvkvf 97 
                      +l++  +
  XP_022928999.1 149 DRLYIDCR 156
                     66666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MNFGLNRHQN HHLEPRNRLD LTMLEPPEPE EEAASSTAVG SDGGDGGVEK EHMFNKVVTP  60
SDVGKLNRLV IPKQHAERFF PLDSSTNDKG LLLNFEDRNG KSWRFRYSYW NSSQSYVMTK  120
GWSRFVKEKR LDAGDTVSFQ RGVGEIGRDR LYIDCRRGRR HELPFHHHSP TTVSIQPSIV  180
IPASATAWGP FVWQPLSATT PQYLPHLQDP TSNRECCPYP YGSVETSGMM FLRTEGRRVA  240
PRLGDEREVE VEPSGGNGGG GNSMTVVEDT PAKRSRLRLF GVNMEMEDPI SLTSDECELL  300
LFSSNSNPKL ASSSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.19e-64B3 family protein