PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929005.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 316aa    MW: 34853.6 Da    PI: 4.5711
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929005.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.6e-19112162155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_022929005.1 112 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 162
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGFDSVFGRP IKYTEHLNHV KLTSVPETRQ RVVRISVSDG DATDSSSDDE PEMFGRQRVK  60
KFVNEITIEP SCSGEGNGIW GGNRSERIGL RRSPGKCGVS RNRRSVKPPI GKKFRGVRQR  120
PWGKWAAEIR DPLRRVRLWL GTYDTAEEAA MVYDNAAIQL RGPDALTNFT TQPPKSSAGK  180
SAGYNSGDES NNNICSPTSV LRCPSPAIEE IHSQIPGEPD NSCMSENLTS EFSSCSDTFI  240
PDDIFAFETT IPTLFDELGD GSFNDFFSDD GSFNGVFHSP VEEIGSGLVF EYPTPPPDDF  300
FQDFSDVFGS DPLVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-46ERF family protein