PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929145.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 295aa    MW: 32636.9 Da    PI: 8.9441
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929145.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-1897147256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg+++++e Aa a++ a+ kl+ge
  XP_022929145.1  97 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSPEAAAYAYDCAACKLRGE 147
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNTMMNRADL QFQLTDVSTA LSNLILTGGG NTLDSIFSHC ENLDRPVGSS VYLQKREVLK  60
RFSQDSRPNG SRDLFSRAYE LLYSRSGAAV GGGERKLYRG VRQRHWGKWV AEIRLPQNRM  120
RVWLGTYDSP EAAAYAYDCA ACKLRGEYAR LNFPNLKELK TDLGAGEFAR LSGLKKLVDA  180
KIQAIFQKIR KGKGKKSVKK QRIGSDLGSG SCSSSSSSSV SLPPAAVELT DEWSWERVQP  240
PVAAEEGLWN FENSPRDVST DCATATATAG LETECYSLAK MPSYDAELIW EVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-42ERF family protein