PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929215.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 264aa    MW: 30064.4 Da    PI: 6.6005
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929215.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.84.7e-1479126355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + h  +Er+RR+++ ++f  L  llP +     kK++Ka+iL  A++YIk+Lq
  XP_022929215.1  79 KDHVLAERKRREKLSQRFIALSALLPGL-----KKMDKASILGDAIKYIKQLQ 126
                     56999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MMEEEQDSSL LFHDQYQLFN ATPTSDSPPL FNHWRSCGGS AAVASSSSQM ILFQEGKFCP  60
AAAEIWPLVN VGRNPPRAKD HVLAERKRRE KLSQRFIALS ALLPGLKKMD KASILGDAIK  120
YIKQLQERVE SLEEMGKNSN IESAIFIKKS HLCNNMNGCC DDIDGEEHNH KTGFSDQKLV  180
EMEAKISDKH VLVRIHCEKH EGLLAKLLEE MEKLNFKIIN GNVFPFGSST QYMVFLLQRN  240
SDFNIESKEL VRKLEDELFK FITT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18590ERKRRE
28691RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-44bHLH family protein