PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929227.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 419aa MW: 46818.4 Da PI: 7.8074

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929227.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.1	1.8e-49	43	168	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ XP_022929227.1 43 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTED 136 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_022929227.1 137 LRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 168 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MAIAAAASSS SSSTMSHEVS STKNNNNNSN STEHDQHEHD IVMPGFRFHP TEEELVEFYL 60 RRKVEGKRFN VELITFLDLY RYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS 120 GYWKATGADR MIRTEDLRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPH HETERYQKAE 180 ISLCRVYKRA GVEDHHPSLP RSLASRASSS SSRMKTSSMS TSTSKNLLPG GSVYVIPTSL 240 PTNFELQFHN HQLQIGTGVE TTTVVVAAAD VSATSSCEEV TTVLGLSKQN PFPTTPLINM 300 AAGSSTPPNS LEQNDHQSNI IQKQQQPSSS YTSFFTPSSN NSLDDLQNLI NYQQQPPLST 360 SAAIVNSLPP PPPYYQPTPP PPPPPPPPPQ QLALNTLPVA FSDRLWEWNP IQDATNPFK

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MAIAAAASSS SSSTMSHEVS STKNNNNNSN STEHDQHEHD IVMPGFRFHP TEEELVEFYL  60
RRKVEGKRFN VELITFLDLY RYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS  120
GYWKATGADR MIRTEDLRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPH HETERYQKAE  180
ISLCRVYKRA GVEDHHPSLP RSLASRASSS SSRMKTSSMS TSTSKNLLPG GSVYVIPTSL  240
PTNFELQFHN HQLQIGTGVE TTTVVVAAAD VSATSSCEEV TTVLGLSKQN PFPTTPLINM  300
AAGSSTPPNS LEQNDHQSNI IQKQQQPSSS YTSFFTPSSN NSLDDLQNLI NYQQQPPLST  360
SAAIVNSLPP PPPYYQPTPP PPPPPPPPPQ QLALNTLPVA FSDRLWEWNP IQDATNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-106	NAC family protein