PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929267.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 274aa    MW: 30775.8 Da    PI: 6.7425
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929267.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.31.3e-161764148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +lv  ++++G g+W++ +   g++R++k+c++rw +yl
   XP_022929267.1 17 RGPWTHEEDHKLVSFITKHGYGSWRSLPVLAGLNRCGKSCRLRWANYL 64
                     89********************************************97 PP
2Myb_DNA-binding51.62.1e-1670115148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++++E++ ++d++  lG++ W+ Ia++++ gRt++++k++w+++l
   XP_022929267.1  70 RGKFSQQEQQVILDLHSILGNK-WSVIASHLP-GRTDNEIKNFWNTHL 115
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MGRSPPSSSS NQIGLKRGPW THEEDHKLVS FITKHGYGSW RSLPVLAGLN RCGKSCRLRW  60
ANYLRPDIKR GKFSQQEQQV ILDLHSILGN KWSVIASHLP GRTDNEIKNF WNTHLKKRLI  120
KMGLDPVTHM PAIYDNTLSA HHLPPPNLEN FLLFHLPTLK QQLEALQMAT LQEYLQLPQL  180
PPPPFTPTFH LQYDRNMSGP YANLPDLEVF GASDDPTWTA VSGDQNGASM WVSSSSSNAP  240
SPLPPVEANS ESESAPLTDE LMFNDYSLFS DIDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65230.12e-71MYB family protein