PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929442.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 250aa    MW: 26803.8 Da    PI: 7.2601
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929442.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702103.43.9e-3269135470
          DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaea 70 
                     + +sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrer  ++a   sk+ +++++a
  XP_022929442.1  69 KVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAA 135
                     5589*********************************************999998888877766554 PP
2DUF70281.32.5e-2513319694155
          DUF702  94 aeskkeletsslPeevsseavfrcvrvssvdd..geeelaYqtavsigGhvfkGiLydqGleek 155
                     + +++ +e+ ++P+ev+s+avfrcvr++++d+  g +++aYqtav+igGh+fkGiLyd+G++++
  XP_022929442.1 133 HAASSGFEIGNFPAEVNSTAVFRCVRMTTLDEptGTDQYAYQTAVNIGGHIFKGILYDHGPDQQ 196
                     44566788999*********************9899*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MAGFFPLGGG GGGSSGGEII HPTDGLLWYK NYESFETEQQ QQGGEGFVYS GENSPARSSL  60
VMVRSGGGKV ISCQDCGNQA KKDCVHMRCR TCCKSRGFLC ETHVKSTWVP ASKRRERLIR  120
TAGGDSKRPR DTHAASSGFE IGNFPAEVNS TAVFRCVRMT TLDEPTGTDQ YAYQTAVNIG  180
GHIFKGILYD HGPDQQHHHH NPPISASPDG GALLITTAES AAPLDPPPSY PAPLNSYIPA  240
GTQFFQPPTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.14e-54SRS family protein