PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929719.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 237aa    MW: 27251.1 Da    PI: 4.4729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929719.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-135397554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + + Er+RR+++N+++  Lr ++P+      +K++Ka+i + A+eYI++L
  XP_022929719.1 53 NIMSERNRRKKLNDRLLALRAVVPNI-----TKMDKASIIKDAIEYIQEL 97
                    5678*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MENILDEYQY YWETNMFLQT EEFDSWGVDE AFYGSYDSSS PDGTPSSLEA SKNIMSERNR  60
RKKLNDRLLA LRAVVPNITK MDKASIIKDA IEYIQELRAE EKRIEAEISD LESGKIKNRA  120
TNEDYDGILR EKRTNKNRQV PEPPPSFPIE VLDLRVNYMG EKTMMVSLTC ERRSDTIMKI  180
CQVIESLKMK IITATITIVA NKLLITLFLE EEIAEEEEVK VKIEAAIAAI SDPQNPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-59bHLH family protein