PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929787.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family CO-like
Protein Properties Length: 326aa    MW: 35686.1 Da    PI: 7.6572
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929787.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.61.1e-071550339
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkgHtv 39
                    ++ C  +++ ++ lfC+ +  +lC  C  ++H +Ht+
  XP_022929787.1 15 KPLCYSCKSAPAALFCRHDAAFLCLRCDAQIH-SHTT 50
                    689*****************************.9875 PP
2zf-B_box23.61.1e-075999539
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39
                     C+ +e+ ++++ C+ +   lC++C   +H +       H++
  XP_022929787.1 59 LCEVCEQAPATITCNADAASLCPSCDADIH-SvnplarrHDR 99
                    69****************************.33566666765 PP
3CCT69.49.1e-24251295145
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 
                     Rea++lRY+eK+k+RkFeK+irY+sRKa+Ae RpRvKGrFvk++e
  XP_022929787.1 251 REARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRVKGRFVKRSE 295
                     9*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MHSFAGGWAA VATAKPLCYS CKSAPAALFC RHDAAFLCLR CDAQIHSHTT GTRHPRVCLC  60
EVCEQAPATI TCNADAASLC PSCDADIHSV NPLARRHDRS AIQPFYDSPP SASVASVFKF  120
LLPTQHQHDV GHPDLKSEDI FFSDMDSLID FDYPTAGDGV VPDQSNPGTE STTQPADYST  180
GNFCGFELCS TRSNLDAISY PSHNLSHSVS SSSLDVVAVP DRNTASDASY PAGQTALPTT  240
EKAVQLRGMD REARVLRYRE KKKNRKFEKT IRYASRKAYA EIRPRVKGRF VKRSEMKSEM  300
ERMYAGAGVG YMSRDGQYGV VPSLIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57660.11e-79CO-like family protein