PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929859.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 286aa    MW: 32590.6 Da    PI: 6.6189
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929859.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.92e-2895155259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK++ gs+fpr+Y+rC+++   gC+++k+v++s++dp++ e+tY+g+H+++
  XP_022929859.1  95 HDGFSWRKYGQKDILGSKFPRGYFRCSHRftlGCKATKQVQKSDTDPTIYEVTYKGTHTCN 155
                     7***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MELTPLIQEL NQGKHLANQL RTHLHLSSSS HAVHLIHQIL RSYDNALLSL ESTPVPTNAP  60
VKNRDVSKKR KVMPKWSERV KVASASASAV EGPLHDGFSW RKYGQKDILG SKFPRGYFRC  120
SHRFTLGCKA TKQVQKSDTD PTIYEVTYKG THTCNRPLHS KTQQQQHHQK PSLQHPMPPK  180
QEQRPDDDEP SCQSFSPEVA AIHVKSEMFD DIDIDNGFCR PLRPPSLLFE SEVQDDDQSP  240
FRESEWFGLC CDFETGVVSI PNSVTNNICI EELEEYCSFD NLELFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-36WRKY family protein