PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022929873.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 328aa    MW: 37344.7 Da    PI: 6.5139
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022929873.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.12.6e-3180184199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    +  + ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022929873.1  80 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSATNDKGLILNFEDPNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFHRGlGDsAR 174
                     89*************************999444457789************************************************66677788 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++ ++r+
  XP_022929873.1 175 DRLFIDWRRR 184
                     8999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEFLTKSNAY SEEEEEEEEE EEDDEIRGVA CDFFPNSRTQ NQEWVQHPPI NQPLDHHPLM  60
DLSLRMETNG FGVVEREHMF DKVVTPSDVG KLNRLVIPKQ HAEKYFPLDS ATNDKGLILN  120
FEDPNGKPWR FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DVVSFHRGLG DSARDRLFID  180
WRRRPNAPTP PPHHHFSNPP LLFLPQSLRW ATARHLPPPA QPPPHHRLYS NYAFEIPNLG  240
MPHNNNSSMY YFRPTSMSSS SSELVVHSEG SSMGIKKPTP GAAKRLRLFG VNMECAAEDG  300
GGGGGEDLSN GGVSRRGKQP FSLNWDLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.13e-69B3 family protein