PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930003.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 245aa MW: 27488.9 Da PI: 8.865

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930003.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.5e-32	16	69	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv a++ LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ XP_022930003.1 16 PRLRWTPELHHCFVVAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRS 69 8****************************************************7 PP
2	Myb_DNA-binding	49	1.4e-15	17	68	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v a++ lGg+ t+k++ + m kg+t ++ks++q+y+ XP_022930003.1 17 RLRWTPELHHCFVVAIQTLGGHhkaTPKLVLQLMDvKGLTISHVKSHLQMYR 68 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MSRNGSVRQY IRSKVPRLRW TPELHHCFVV AIQTLGGHHK ATPKLVLQLM DVKGLTISHV 60 KSHLQMYRST RADIGRQDQK CSSVGRKVSN LEEEDEDGCV EEENVKGGGV IYRSRTTTQT 120 SASKRGNRSS RNDGFYGHKE IKMMMIMGDS ESHAAALNQS AANHAFFKMM KKEDEEKELS 180 LCLSLQHHCH GSSSEISEAI SSSSSKLDNN HNNSYRDCSS WSYGRQQQQQ IGVNLELSMA 240 LCGSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-31	G2-like family protein