PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930018.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 235aa    MW: 25501.7 Da    PI: 10.029
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930018.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.94e-09194219227
                     -S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                     +  +Cr +  +G C++G +C+FaHg+
  XP_022930018.1 194 RADICRSWEDSGSCRFGHKCQFAHGK 219
                     5679********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEDRQGKRSS KASTIKGLNA TVRPIKIQMD NHLVIGGTGH YHQETNSKIP TILDRYAEKH  60
DRSTPIVSYF RSRSPVVGKL PSVGDTFSTP VADVINANYR SSIINHFASS TSGSSSFGSR  120
RGGSSLSPLS AIENLETTPV RSPQIYGTPL KVHEEVIVMD EILISSVHGG AKTLKSALES  180
GGGGGSSLSK NQYRADICRS WEDSGSCRFG HKCQFAHGKE ELRPVHLPLK TKPKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.12e-08C3H family protein