PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930020.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 207aa    MW: 23252.6 Da    PI: 8.6841
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930020.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.5e-114085555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +  +ErrRR+++ +++  Lr  +P       + ++Ka+i e A+ YIk+Lq
  XP_022930020.1 40 NLHAERRRRQKLSDRLLLLRATVPII-----TNMNKATIIEDAITYIKQLQ 85
                    5579*********************6.....58*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MAYASSGSDD LRTFEEQADT RSITNRRRPT DESIEYKSKN LHAERRRRQK LSDRLLLLRA  60
TVPIITNMNK ATIIEDAITY IKQLQKRVNI LKDQLVELEG SAEKTPWPTI PQDSTTPTQS  120
NKGYIQADVS VSQIDEHKLW IKILFEKRKG AFTKLIQAMN SVGFELTDTS VTTVQGAVLV  180
TTLINGICTS TAQQTEDLLL GIVNACI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12648RRRPTDESIEYKSKNLHAERRRR
22650RRRPTDESIEYKSKNLHAERRRRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-41bHLH family protein