PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930117.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 272aa MW: 30996.9 Da PI: 10.5806

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930117.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	138	7.8e-43	104	242	2	131
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssa.....sec....eaesssssasn 84 +gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+s+tieWLl ++ aik+l + + + s c ea+s+ +n XP_022930117.1 104 TGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSlanN---SghrygSVCcgstEAVSEMI-RDN 194 79************************************************************6542...33456677776422222222.233 PP TCP 85 sssgkaaksaa.kskksqksaasalnlakesrakarararertrekmr 131 ++ g aak+aa +++k++ + + + +esr +ararar+rt k+ XP_022930117.1 195 NGGGGAAKEAAfMATPKHKQSRALRRVGRESRDRARARARQRTMLKKI 242 44446666666688888888888999**************988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MNPNMFGSNN NTQTNHIALQ HQEQHERNLH LHFPHPFLDQ DDLFLTHILS SQHFFIGADC 60 WGEQEQEQHH DQTKQNSEKP RIEVVKKKKK CSGNRKNGSS RKKTGKKDRH SKIYTAQGPR 120 DRRMRLSLQI ARKFFDLQDM LGFDKASNTI EWLLSNSTSA IKDLQHSLAN NSGHRYGSVC 180 CGSTEAVSEM IRDNNGGGGA AKEAAFMATP KHKQSRALRR VGRESRDRAR ARARQRTMLK 240 KIKQPISNLQ DVSSVVAISD DLWDFASIQS IL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	107	KKKKKCSGNRKNGSSRKKTGKK
2	87	108	KKKKKCSGNRKNGSSRKKTGKK
3	226	236	RDRARARARQR
4	239	244	LKKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-30	TCP family protein