PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930177.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 356aa MW: 40720.4 Da PI: 7.8311

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930177.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.6	1.2e-53	12	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+e+d++k+ePwdL++k++ ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_022930177.1 12 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREIDLNKIEPWDLQEKCRIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 105 69**************************.99**********964433122456********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_022930177.1 106 RN-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 141 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGSSGGSGGG GVPPGFRFHP TDEELLHYYL KKKVSFQKFD MEVIREIDLN KIEPWDLQEK 60 CRIGSTPQNE WYFFSHKDRK YPTGSRTNRA TNAGFWKATG RDKCIRNSYK KIGMRKTLVF 120 YRGRAPHGQK TDWIMHEYRL EDTDDPHFNN SEDGWVVCRV FKKKNLFKVT NEDGGGGSSA 180 NSDPQLNNAQ SSASITTPRT FMHRESQHQL RQPHQNYASL PTFELNKSDL ALHYMPSTAP 240 PSHFPHHLFH PNISTMNNNH KSLGDASEAY DYPTLSSLPP DTPIMVKQLM SNPETSQPAE 300 SMTEPWAMLD RLVTSHLGNE DSSKDVRFED EHGLSSVSQI NQLSMRGEMD FWRYAK

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGSSGGSGGG GVPPGFRFHP TDEELLHYYL KKKVSFQKFD MEVIREIDLN KIEPWDLQEK  60
CRIGSTPQNE WYFFSHKDRK YPTGSRTNRA TNAGFWKATG RDKCIRNSYK KIGMRKTLVF  120
YRGRAPHGQK TDWIMHEYRL EDTDDPHFNN SEDGWVVCRV FKKKNLFKVT NEDGGGGSSA  180
NSDPQLNNAQ SSASITTPRT FMHRESQHQL RQPHQNYASL PTFELNKSDL ALHYMPSTAP  240
PSHFPHHLFH PNISTMNNNH KSLGDASEAY DYPTLSSLPP DTPIMVKQLM SNPETSQPAE  300
SMTEPWAMLD RLVTSHLGNE DSSKDVRFED EHGLSSVSQI NQLSMRGEMD FWRYAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-144	NAC family protein