PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930228.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 335aa MW: 36773.4 Da PI: 7.0672

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930228.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.3	5.3e-18	198	252	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Le+ F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k XP_022930228.1 198 RKKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTK 252 788899***********************************************98 PP
2	HD-ZIP_I/II	124.7	4.4e-40	198	286	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rlskeq+++LE+sF+++++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr+ XP_022930228.1 198 RKKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRA 286 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MELGLRLGDA PNSNNPFGVR SIPSSSSLMA LGFCVGLGHG SGSGSGFGRV HDEDGRDVKD 60 EDEDDDEKTI PGSGYGLGPP VQLDLLPLAP VPRSSHQSSS PLPFSCLSHP LMPELGCTDK 120 VLDVNRPPAL AAAVAMIPAE ETEDQSPNST VTSFQMDFGV RNGGGRGRTR SKRSSDMEME 180 KERSSSRMSD DEENASARKK LRLSKEQSAF LEQSFKQHST LNPKQKAALA KQLNLRPRQV 240 EVWFQNRRAR TKLKQTEEDC EYLKRWCETL TEENRRLQKE LQELRAFKAS QPFYSHLPAT 300 TLTMCPSCER VVATAPAASI ATTCTITAAP PRILI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	173	RTRSKR
2	247	255	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	1e-68	HD-ZIP family protein