PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930257.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 562aa MW: 61924.8 Da PI: 6.282

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930257.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.1	9.7e-29	103	156	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_022930257.1 103 KPRVVWSVELHQQFVAAVKQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 156 79*****************.******************************8 PP
2	Myb_DNA-binding	43.6	6.6e-14	105	155	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v avkqlG + +k+I + m+ g+t++++ s++qky+ XP_022930257.1 105 RVVWSVELHQQFVAAVKQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 155 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MSADDGKNVV MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKTEWKDLE QSGSVDDGDR 60 EKNASEGANY SSSVYEGSWN SSKRRRDTEE EAEERDDTST LKKPRVVWSV ELHQQFVAAV 120 KQLGIDKAVP KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSSSHSL QCNLNNSFMN 180 PQDPPFGPMA SFNGIDLRTL SVTGHLSPQS LAALQATEFR RPATAKSSMS MALVDQNNLF 240 SFENPKLRFV EDQTPHLNNS KPINLFHGIP TKMEPKQLAI MHPSVQTQGN INMPLNIKTE 300 HGGTQLMHHL SHQQTGGQAL SNSPASHLPR ISSSFPIISG SITSRNGTAD STQGPGYNLV 360 SPASLMMNFP MNQLTELSNN FSLPSDSTVS TLTCKGVFQE EISSDLHGSD GLMSSYDVFS 420 DLHLQKSHDW DSQNVGSLAF GTSHHGNFIQ DSFDVSPSTL IHHGFPSSQT NGQNHNSSSA 480 GKTIFSFSDA TQPENAQSNA EKLPLDPGDV KPQRIPDASY ETDLLSENFG QDELLSVFLK 540 QEQQGDNGSV DFSGYQTENI CV

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MSADDGKNVV MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKTEWKDLE QSGSVDDGDR  60
EKNASEGANY SSSVYEGSWN SSKRRRDTEE EAEERDDTST LKKPRVVWSV ELHQQFVAAV  120
KQLGIDKAVP KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSSSHSL QCNLNNSFMN  180
PQDPPFGPMA SFNGIDLRTL SVTGHLSPQS LAALQATEFR RPATAKSSMS MALVDQNNLF  240
SFENPKLRFV EDQTPHLNNS KPINLFHGIP TKMEPKQLAI MHPSVQTQGN INMPLNIKTE  300
HGGTQLMHHL SHQQTGGQAL SNSPASHLPR ISSSFPIISG SITSRNGTAD STQGPGYNLV  360
SPASLMMNFP MNQLTELSNN FSLPSDSTVS TLTCKGVFQE EISSDLHGSD GLMSSYDVFS  420
DLHLQKSHDW DSQNVGSLAF GTSHHGNFIQ DSFDVSPSTL IHHGFPSSQT NGQNHNSSSA  480
GKTIFSFSDA TQPENAQSNA EKLPLDPGDV KPQRIPDASY ETDLLSENFG QDELLSVFLK  540
QEQQGDNGSV DFSGYQTENI CV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-107	ARR-B family protein