PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930268.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 149aa    MW: 17136.2 Da    PI: 7.0457
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930268.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.83.9e-055072123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_022930268.1 50 YSCGFCKRKFRSAQALGGHMNVH 72
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MESKSLKMNS PQEQLRMPNK PNNTRGDHQE EEEEEEEDIV GFAWGSSRAY SCGFCKRKFR  60
SAQALGGHMN VHRRDRAKLR RSPPLDSPHF HGSSSQPIKF LKLYDFSSLS GEEEADGECK  120
IWKNVKKFVK EIDFLGSSNE IDLELRLGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.16e-18C2H2 family protein