PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930289.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 581aa MW: 62923 Da PI: 6.8938

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930289.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51	3e-16	285	322	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C + C+C++C+N+ XP_022930289.1 285 CKRCNCKKSKCLKLYCECFAAGVYCIDPCSCQECFNQP 322 89**********************************86 PP
2	TCR	51.2	2.4e-16	369	408	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN+ XP_022930289.1 369 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNTF 408 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MDSTPKKKPT TTHPPPPPPL PKFEDSPVFN FINSLSPIKP LKSIHITQTF NSISFPSLPV 60 FTSPKRPNFP NPSRSSPPVS SNEGTVIIMD QLLEIFVPEI PTADDGSTPG MQPPETVNPD 120 AGEVGISSEA LELGSDEAED ENCDSFGNKP LLNLQSGNMP RRCLDFEMAG TPNTAATATA 180 GGDGSIRGSS SSSSSSSSFR CTLPGIGLHL NAIAATLKHE NLSHPSSSAS ISSPNSIQDQ 240 PLMASSATEI ENPCHEPANL NGENLNLINP KKNGTLMENA EIGACKRCNC KKSKCLKLYC 300 ECFAAGVYCI DPCSCQECFN QPIHEAMVLE TRRQIESRNP LAFAPKVIMN SDSFSELGDD 360 SNKTPASARH KRGCNCKKSS CLKKYCECYQ GGVGCSINCR CEGCKNTFGR KDESAVIETD 420 TKQEEEGREH CLKTAEVQKD EDQQNPKSAV PSTPLGRCRS LIPLPFQLKR KLPSFIDDES 480 SYRLSVRFKL EKQGIIQTET RFEKTPSADV MSETICNGCS SSTGVVKSVS PNSKRITLPP 540 PQGDFRPLPS TRIGRKLILQ SIPSFPSLTN LNSRVNGTSE L

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MDSTPKKKPT TTHPPPPPPL PKFEDSPVFN FINSLSPIKP LKSIHITQTF NSISFPSLPV  60
FTSPKRPNFP NPSRSSPPVS SNEGTVIIMD QLLEIFVPEI PTADDGSTPG MQPPETVNPD  120
AGEVGISSEA LELGSDEAED ENCDSFGNKP LLNLQSGNMP RRCLDFEMAG TPNTAATATA  180
GGDGSIRGSS SSSSSSSSFR CTLPGIGLHL NAIAATLKHE NLSHPSSSAS ISSPNSIQDQ  240
PLMASSATEI ENPCHEPANL NGENLNLINP KKNGTLMENA EIGACKRCNC KKSKCLKLYC  300
ECFAAGVYCI DPCSCQECFN QPIHEAMVLE TRRQIESRNP LAFAPKVIMN SDSFSELGDD  360
SNKTPASARH KRGCNCKKSS CLKKYCECYQ GGVGCSINCR CEGCKNTFGR KDESAVIETD  420
TKQEEEGREH CLKTAEVQKD EDQQNPKSAV PSTPLGRCRS LIPLPFQLKR KLPSFIDDES  480
SYRLSVRFKL EKQGIIQTET RFEKTPSADV MSETICNGCS SSTGVVKSVS PNSKRITLPP  540
PQGDFRPLPS TRIGRKLILQ SIPSFPSLTN LNSRVNGTSE L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-107	CPP family protein