PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930317.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 252aa    MW: 28954.3 Da    PI: 10.6716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930317.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-0896141454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h  +Er RR++ + +++eL ++lP+      +K++K +i+++A + I +L
  XP_022930317.1  96 RHMLNERMRREKHRRSYSELHSMLPSK-----TKNDKNSIVQMAARTIEEL 141
                     58889*********************9.....8***************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDDGFPVEFW HTDLHWLDPP IPVSDPAPGQ ISAFVPYLPQ PTIGSRQKNN PITATTIIAT  60
YSENVHKRVI EYWRKQWQEK KKPAEMGDLE RERSHRHMLN ERMRREKHRR SYSELHSMLP  120
SKTKNDKNSI VQMAARTIEE LKASEGMLKK RNIELEMALS AKKRKQEKGT TPIRVAVANP  180
SSGINSMLGV LNLLKTVGVN AKAIHATFLD SRFSTHIAID SHMRAAEVER ALQMTLSEAE  240
RKLQRQMRGR FP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103110MRREKHRR
2149165KKRNIELEMALSAKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.14e-38bHLH family protein