PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930379.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 229aa    MW: 25653.9 Da    PI: 5.9392
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930379.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.82e-2170119356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a+++a+k+++ge
  XP_022930379.1  70 YRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDEAAKRIRGE 119
                     9*******.**********94....35**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MCGGSLISGI IEKKRGRKLR NGSLWPDTDH FSDLLGLDYC ALKTETSQKE CRATAVPEPE  60
KTRKARKNIY RGIRQRPWGK WAAEIRDPQK GVRVWLGTFN TAEEAARAYD EAAKRIRGEK  120
AKLNFAPRPQ PLPVSQPPAK KRCVAHELTS DCFSSTSPAP ASTRVNNSCE IDGLYYGEEL  180
ASLRSFLDLD FEEEQEPSQV GGSDEFGQAV ELWMMDDPSL NEEKFGEVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11219EKKRGRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-44ERF family protein