PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930460.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 263aa MW: 29226.9 Da PI: 8.9132

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930460.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.8	5.1e-34	105	163	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+agC vkk+vers++dp+vv++tYeg+Hnh+ XP_022930460.1 105 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQ 163 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MKDEIPSCML EFPMDSSSFK PSTLFDLFDL FSAATTPPPR PPSSSSSDRL LNIPSTPNSS 60 SLSSSSDAGD LDPFNQHKLK PKNKNKKRAT QPRFAFMTKT EMDHLDDGYR WRKYGQKAVK 120 NSPYPRSYYR CTTAGCGVKK RVERSSHDPS VVVTTYEGQH NHQSPILPRG SLSPSISTSA 180 ALHPPPLLFQ HQQYTYTYTP PPPPPMELVT CGGFEPMFHC FGEERRRIGG SSPSSASFKD 240 HGLLQDMIVP SSSSSSLHIP KEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	2e-45	WRKY family protein