PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930609.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 760aa    MW: 83133.4 Da    PI: 6.2897
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930609.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.72.7e-2095150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++++e++F+++++p+ ++r+eL+k+lgL+  qVk+WFqN+R+++k
  XP_022930609.1  95 KKRYHRHTQHQIQQMEAFFKECPHPDDKQRKELSKELGLEPLQVKFWFQNKRTQMK 150
                     688999***********************************************999 PP
2START210.46.5e-662784981206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+++a+ +ep+W++      + +n de++++f+++ +     +s+ea+ra++vv m++  lve l+d++ qW+  ++    +a+tl
  XP_022930609.1 278 ELAVAAMEELIRMAQMGEPLWMTALdgstTLLNPDEYVRTFPRGIGpkpagFSTEASRATAVVVMNHISLVEMLMDVN-QWSAVFTgivsRATTL 371
                     57899********************9999999***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     e +s+g      galq+m +elq++splvp R+++fvRy++q+g+g+w++vdvS+d+ ++ p      R++++pSg+li+++++g+skvtwvehv
  XP_022930609.1 372 EILSTGvagnydGALQVMASELQVPSPLVPtRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPA----LRCRRRPSGCLIQEMPQGYSKVTWVEHV 462
                     ************************************************************995....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+w atl+rqce+
  XP_022930609.1 463 EMDDRGIHSLYNQLVRSGHAFGAKRWIATLDRQCER 498
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    
MPAGMMIPAR NAPSMIGRNG NVGVFGSPAS LVLGQANMME GAQLHALDMP QSGLPDSDYG  60
VMKEAEDFDS ATKSSSENHE VGSGDDQDHR QRSKKKRYHR HTQHQIQQME AFFKECPHPD  120
DKQRKELSKE LGLEPLQVKF WFQNKRTQMK THHERHENTH LRTQNEKLRA DNMRYREVLS  180
NATCPNCGGP TAIGEMSFDE HHLRLENARL REEIDRISAI AAKYVGKPVS SFPLLSPSIP  240
THPLELGMGS YGADMFGAAD LLRTITTPSE ADKPMIIELA VAAMEELIRM AQMGEPLWMT  300
ALDGSTTLLN PDEYVRTFPR GIGPKPAGFS TEASRATAVV VMNHISLVEM LMDVNQWSAV  360
FTGIVSRATT LEILSTGVAG NYDGALQVMA SELQVPSPLV PTRESYFVRY CKQHGEGTWA  420
VVDVSLDNLR PAPALRCRRR PSGCLIQEMP QGYSKVTWVE HVEMDDRGIH SLYNQLVRSG  480
HAFGAKRWIA TLDRQCERLA SAMTMSIPNG DAGVIMNQEG RKSMLKLAER MVMSFCGGVS  540
ASTAHTWTTL SGTGADDVRV MTRKSIDDPG RPPGIVLSAA TSFWLPVPPK RVFDFLRDEN  600
SRNEWDILSN GGVVQEMAHI ANGRDTGNSV SLLRVNSPNS SQSNMLILQE NITDQTAAFV  660
IYAPVDIVAI NVVLNGGDPD YVALLPSGFA ILPDGTAASN DGANNIMEHG SGGSLLTVAF  720
QILVDSIPTA KLSLGSVATV NNLIACTVER IRASLSCENP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein