PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930626.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 441aa MW: 49065.4 Da PI: 4.8701

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930626.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.6e-33	230	284	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHe+Fveav++LGG e+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_022930626.1 230 RPRMRWTPELHESFVEAVDKLGGGENATPKGVLKLMNVEGLTIYHVKSHLQKYRT 284 59****************************************************8 PP
2	Myb_DNA-binding	57.2	4e-18	232	283	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av +lGgg t+k + + m+ +g+t +++ks++qky+ XP_022930626.1 232 RMRWTPELHESFVEAVDKLGGGenaTPKGVLKLMNvEGLTIYHVKSHLQKYR 283 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MSSSYQVLPK PFEEKYPKLA VSFQVSPGSE AMRHPIPRQV PPLVSNSGTV GHLFSSSSGF 60 RNDFPLMQPL SRERNVQFSS FVSRSDDDGS LLLLHGSSHS EQSTMVTNDL NENGSSWSTD 120 ALQDLLDFSE NAADQNVEAQ SLTGVLMSDD RAKRNDWPDW ADQFISVDDA MEPNWSEIFS 180 DANAGDAEVE VLKSSSAHFH APQNQTNQVD SVPTAEFHSV SNSLSMSSTR PRMRWTPELH 240 ESFVEAVDKL GGGENATPKG VLKLMNVEGL TIYHVKSHLQ KYRTARYKPE SSEGSSGKKL 300 NRIEEMKSLD LKTSMGITEA LRLQMDVQKR LHEQLEIQRN LQLRIEEQGK YLREMFEQQR 360 KMETKLKTSS SILENMPLAD DQPENSEQGR VAAGTSMDNA DEDGLPAASR KQKAHEIEAI 420 LSSDDISSPD AKRSKSDATG L

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MSSSYQVLPK PFEEKYPKLA VSFQVSPGSE AMRHPIPRQV PPLVSNSGTV GHLFSSSSGF  60
RNDFPLMQPL SRERNVQFSS FVSRSDDDGS LLLLHGSSHS EQSTMVTNDL NENGSSWSTD  120
ALQDLLDFSE NAADQNVEAQ SLTGVLMSDD RAKRNDWPDW ADQFISVDDA MEPNWSEIFS  180
DANAGDAEVE VLKSSSAHFH APQNQTNQVD SVPTAEFHSV SNSLSMSSTR PRMRWTPELH  240
ESFVEAVDKL GGGENATPKG VLKLMNVEGL TIYHVKSHLQ KYRTARYKPE SSEGSSGKKL  300
NRIEEMKSLD LKTSMGITEA LRLQMDVQKR LHEQLEIQRN LQLRIEEQGK YLREMFEQQR  360
KMETKLKTSS SILENMPLAD DQPENSEQGR VAAGTSMDNA DEDGLPAASR KQKAHEIEAI  420
LSSDDISSPD AKRSKSDATG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	5e-94	G2-like family protein