PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930698.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 291aa    MW: 32923.3 Da    PI: 5.8463
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930698.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94e-174690147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
   XP_022930698.1 46 RGRFSFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 90
                     89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGLGIGVIFL RMLLRPFCWD VFVGLQRCGK SCRLRWTNYL RPDIKRGRFS FEEEETIIQL  60
HSVLGNKWSA IAARLPGRTD NEIKNYWNTH IRKKLLRMGI DPVTHTPRID LLDLSSIIAT  120
AIRSHPILGL STLLNNQVQT LNPESLRLIS TLLALKQERD PNANNSHLQN QDHAQIQAQM  180
DTLSQLLQPN EEFNNNTNSS MIPITNFVEY SNSQEHMNFL APNLSGDDGL IPMASDLGFE  240
SVISTPKSSP TPLNSSSTCI NNSSHEDERD SFCSNFLQFE IPEGLDFNDL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.15e-75MYB family protein