PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930718.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 258aa    MW: 29417.3 Da    PI: 7.2825
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930718.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-0869117655
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 
                      ++E++RR+++++  ++L +llP+ +   +++  l   +   +Av+YIk+L+
  XP_022930718.1  69 RIVEKNRRNQMKTLCSQLNSLLPNqD---SKEIsLALPDQIDEAVKYIKELE 117
                     689*********************55...666678889***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MTSSKITSFH YLTKSLYPLC IMVYKCHLSS SHFCNLLHLH LLLHRSLYQM DRHFQFSTSS  60
SSAAKIERRI VEKNRRNQMK TLCSQLNSLL PNQDSKEISL ALPDQIDEAV KYIKELEKKV  120
NLAKEKKEKL EGKNKSSMNI ESSSSSSSSS ASPQLKIHQS GRSLEIILSS GLDNQYLFSE  180
TISILQEEGV EVVNASFSVS GSSVFQTFHA QLEGSMIEFE AAKVTERLKR LVYGSNSDME  240
LQKEKQWWDE FPSDDLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-21bHLH family protein