PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930766.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 276aa    MW: 29943 Da    PI: 6.4197
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930766.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.6e-2966124259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY+ +Hnh+
  XP_022930766.1  66 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLVITYSFDHNHQ 124
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MDRRVRTNPF LSEQEDPGAM SDDGLPGSPT DGNGSRKRRG GQKRVVSVPI GDMEGSKSKG  60
EAYPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP TKLVITYSFD  120
HNHQLPATKS HHHQHQHHNS SPPSAAIAED SSPGSATTSP SNSDHTNATP ASPAVVFASQ  180
PELELGGDSL MIKPCIGDFG WLADVAYDRI LEGPIYGGGD MFDDADVMVL SARGNDEDES  240
LFADLGELPE CSVVFGRRRA VQPDGPNRTC GRVLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.24e-64WRKY family protein