PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930778.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SBP
Protein Properties Length: 192aa    MW: 21406.3 Da    PI: 9.5896
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930778.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.66.3e-4267144178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+e+C+adlseak yhrrhkvCevh+k++vvlv g +qrfCqqCsrfhelsefDe krsCrrrLa+hnerrrk +a
  XP_022930778.1  67 CCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEMKRSCRRRLAGHNERRRKISA 144
                     6**************************************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MDVGKIETTH QQKQRVVMEK GRVKEAMVVV DEDGEYDEDK KRKGVIVSVG GGGSGKKAAG  60
GGGGMRCCQA EKCTADLSEA KPYHRRHKVC EVHAKSQVVL VGGFRQRFCQ QCSRFHELSE  120
FDEMKRSCRR RLAGHNERRR KISAESNAEC SIRKGTGGAQ MKDSSVCGQA DDQGRIQMTI  180
QENAAYKHFQ IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.15e-46SBP family protein