PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930812.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 271aa    MW: 31004.2 Da    PI: 9.0534
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930812.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.31.2e-1519109186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt + + +L+ea  e++ +l+rg+l+ ++W+ev++++     +er+  r+++qCk++++ l+++yk +k++ ++   + +s +p+f+ l+
  XP_022930812.1  19 CWTLDDTSTLVEAWGERHLDLNRGSLRYKHWQEVADAVnschnHERKSIRTAIQCKNRIDTLKRKYKIEKARIQESGGTYVSAWPFFSCLD 109
                     7**********************************************************************99998889999*****9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MALSQPSPSA STFPVREDCW TLDDTSTLVE AWGERHLDLN RGSLRYKHWQ EVADAVNSCH  60
NHERKSIRTA IQCKNRIDTL KRKYKIEKAR IQESGGTYVS AWPFFSCLDS LIGNSRKSST  120
PAAVSYCKAL TATTPGMSLF PKIPVGPRSG TKKRRLSHVY GSFCNSHLSQ DLNSKHDEGK  180
DDMDSENHFS SPRFKDRDVG YRKLADAIGT IADIFEKVEV AKQRHMVELE MQRMQFVKDL  240
EYQRMQLLME MHLQMQKIKC SRRDSGADCY S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-53Trihelix family protein