PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930878.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 213aa    MW: 23589.6 Da    PI: 8.6468
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930878.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.7e-212473255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd ++    ++r++lg+f+tae+Aa+a++aa+ +l+g
  XP_022930878.1 24 RFRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTAEDAARAYDAAAFSLRG 73
                    69*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MRQGRATDPL AVAQTVHEPV KEVRFRGVRK RPWGRYAAEI RDPWKKTRVW LGTFDTAEDA  60
ARAYDAAAFS LRGPKAKTNF PLHPSAISVH QQIHFSQEPH DSRGFCKISK SPVKRPTSSS  120
LSSTVESFSG PRVSIPATSV PKLRRKSLPP VSPDDCHSDC DSSSSVVEDS EEYAQTPSIH  180
KVLPFDLNLP PPLQSLQDID ISGDDLQVTT LCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-27ERF family protein