PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930891.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 271aa MW: 29633.9 Da PI: 7.8776

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930891.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.8	1.6e-33	21	110	2	81
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec.eaesssss 81 +++kdrhsk+ T++g+RdRRvRlsa++a+rf+d+qd+LG+d++sk+++WL+++ak ai++l ++ +++++++ e+e++ss+ XP_022930891.1 21 TARKDRHSKVFTSKGPRDRRVRLSAHTAIRFYDVQDQLGYDRPSKAVDWLIKKAKFAIDKLRELppyspiangFADPNQKTgETETESSE 110 789*************************************************************87766666522222222211222211 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MKSSAAAEIV PVQGGHIIRS TARKDRHSKV FTSKGPRDRR VRLSAHTAIR FYDVQDQLGY 60 DRPSKAVDWL IKKAKFAIDK LRELPPYSPI ANGFADPNQK TGETETESSE LQSAVGHFAP 120 SLEPFFPTTS ATTSINFQGY PVDLILTPTD PPRDLALSLH NFHESRLIPS EQNANSSPGN 180 YQRLIGDSIP AGYEGGDAGL WLQQPLMGQN STAAFSQVQM HGWSDQIRQS AGHGGRLQGP 240 SEFCTPSRIR GEGVEDGVVL GSHSSSPNYH R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	2e-46	TCP family protein