PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930942.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 230aa    MW: 26486.1 Da    PI: 7.464
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930942.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.8e-10108148451
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV++  k+ +W A I++      +k+++lg+  + eeAa ++++a+ 
  XP_022930942.1 108 RGVYF--KNMKWQAAIKVD-----KKQIHLGTVESQEEAAHLYDRAAF 148
                     9**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVSLRRRKLL GLCTGKGSFD APVSKSSENS TAEDLEHCTN FISVHPICSN EFNEIEENPV  60
ANLETESSRV SVLDTSKEKS DEPFAEPPVK RRKRHRRKQF PEECFLMRGV YFKNMKWQAA  120
IKVDKKQIHL GTVESQEEAA HLYDRAAFMC GREPNFELPE AEKKELRKFN WDEFLAMTRL  180
AIANKKQKRV SPESKNSKLP IVGNDDLNKR QDEFIDLSAP EDIEPLALKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.16e-40ERF family protein