PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930943.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 229aa    MW: 26357 Da    PI: 7.8943
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930943.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.8e-10107147451
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV++  k+ +W A I++      +k+++lg+  + eeAa ++++a+ 
  XP_022930943.1 107 RGVYF--KNMKWQAAIKVD-----KKQIHLGTVESQEEAAHLYDRAAF 147
                     9**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVSLRRRKLL GLCTGKGSFD APVSKSSENS TAEDLEHCTN FISVHPICSN EFNEIENPVA  60
NLETESSRVS VLDTSKEKSD EPFAEPPVKR RKRHRRKQFP EECFLMRGVY FKNMKWQAAI  120
KVDKKQIHLG TVESQEEAAH LYDRAAFMCG REPNFELPEA EKKELRKFNW DEFLAMTRLA  180
IANKKQKRVS PESKNSKLPI VGNDDLNKRQ DEFIDLSAPE DIEPLALKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.16e-40ERF family protein