PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930987.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 286aa    MW: 32119.5 Da    PI: 7.4479
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930987.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.14.9e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l+d v++ G g+W++ +++ g++R++k+c++rw +yl
   XP_022930987.1 14 KGPWTPEEDEKLIDFVAKNGHGSWRALPERAGLNRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding56.56.4e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+  +++++k lG++ W++Ia++++ gRt++++k++w+++l
   XP_022930987.1  67 RGNFSKEEESSIIELHKTLGNR-WSKIASHLP-GRTDNEIKNFWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGRSPCCDEH GIKKGPWTPE EDEKLIDFVA KNGHGSWRAL PERAGLNRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEESSIIE LHKTLGNRWS KIASHLPGRT DNEIKNFWNT HLKKKLLQMG  120
IDPTTHKPRT DLLNLSPLIN GINNPLNSDY LKVQTEIAKL QVLDNICHLL NPTTINEPPN  180
PNPNPYSSQF QADFSTRLTP VSGFENGLVG LHTGDVNYYP LPPLICESPG STSNVNQIEC  240
GTYPFCGRPK PPPIFDTLES MMNEEPSVSY WTRVLLSTIE GGVCIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.23e-82MYB family protein