PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930993.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 694aa MW: 76150.5 Da PI: 4.8591

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930993.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	511	556	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_022930993.1 511 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 556 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MTDCRLPSVM NFWADENASM MDAFMSTDLN SFWVTPPQPQ QQQQQLPQQP YASVSAASDP 60 SKGVGQSLPP SSMAVFNQET LQQRLQALIE GAQESWTYAI FWQSSYDCSG ATVLGWGDGY 120 YKGEEDKGKE KAKSSTSKSE QEYRKKVLRE LNSLISGSPT SEDDAVDEVV TDTEWFFLVS 180 MTQSFVSGVG LPGQAFFDSN PIWVAGSDRL AGSFCERARQ GQVFGLQTVV CIPSTNGVVE 240 LGSSEFICQS SDLMNKVRVL FNFNNLEVET WPISGVDQGE NDPSSLWITE PSNAIEIRDP 300 ATVSSNNNNN NNNNPVASAP TPTTTNSQPV SKITSQIETP KSSVVTETPT SVPPSQNSHR 360 QSQAVQTQSF FTRELNFSEF GYDNSSLKDG NSHSLKPESG EILNFGESKR SSFPKTDTLP 420 SGSSQFGADE NKKRSPPSRG SNEEGMLSFT SGVILPSSGA LKSGGGIGDS DHSDLEASVI 480 REVESSRAVE PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM 540 DKASLLGDAI SYINELRGKL QTAESDKEDL QKQLDSVKKL MMSNKDSCIS TSNQPPPDED 600 IKASNIHGNH SGIETDVDVK IISWDAMIRI QSSKKNHPAA RLMAALEELD LDINHASISV 660 VNDLMIQQAT VKMSRLYTQE QLRLAISSKL GAPR

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MTDCRLPSVM NFWADENASM MDAFMSTDLN SFWVTPPQPQ QQQQQLPQQP YASVSAASDP  60
SKGVGQSLPP SSMAVFNQET LQQRLQALIE GAQESWTYAI FWQSSYDCSG ATVLGWGDGY  120
YKGEEDKGKE KAKSSTSKSE QEYRKKVLRE LNSLISGSPT SEDDAVDEVV TDTEWFFLVS  180
MTQSFVSGVG LPGQAFFDSN PIWVAGSDRL AGSFCERARQ GQVFGLQTVV CIPSTNGVVE  240
LGSSEFICQS SDLMNKVRVL FNFNNLEVET WPISGVDQGE NDPSSLWITE PSNAIEIRDP  300
ATVSSNNNNN NNNNPVASAP TPTTTNSQPV SKITSQIETP KSSVVTETPT SVPPSQNSHR  360
QSQAVQTQSF FTRELNFSEF GYDNSSLKDG NSHSLKPESG EILNFGESKR SSFPKTDTLP  420
SGSSQFGADE NKKRSPPSRG SNEEGMLSFT SGVILPSSGA LKSGGGIGDS DHSDLEASVI  480
REVESSRAVE PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM  540
DKASLLGDAI SYINELRGKL QTAESDKEDL QKQLDSVKKL MMSNKDSCIS TSNQPPPDED  600
IKASNIHGNH SGIETDVDVK IISWDAMIRI QSSKKNHPAA RLMAALEELD LDINHASISV  660
VNDLMIQQAT VKMSRLYTQE QLRLAISSKL GAPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	493	501	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-176	bHLH family protein