PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931036.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 501aa MW: 56226.5 Da PI: 6.3044

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931036.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.2	7.8e-28	265	318	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022931036.1 265 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 318 6799***************.******************************8 PP
2	Myb_DNA-binding	42.3	1.7e-13	268	317	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022931036.1 268 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 317 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MLHIAVYYCN DEKEALSAIM NTPENFHIAI LEMCKGNYGE SFKLLGSSKD LPIIMTSDVY 60 CLTTMMKCIA LGAVEFLLKP LSEDKLRNIW QHVLHKAFSS TPKPEVDSAA SLMQLQLESE 120 DNNGVLKDTE GLSWIQDIVW EQEQPDGSVK SQLNQGSSLQ GFWESGDQMN CPMETDCSDK 180 HVQSNFVETT SHDLVCEDTL QEGQPQLSGK VMDKEDENFA VGLNAESNVY QHLQNKYGVK 240 SSPSAAEQSI QGSDVNPSAS SKAKKTKVDW SPELHRKFIQ AVEQLGIDRA IPSKILELMK 300 VEGLTRHNVA SHLQKYRMQK KHAVHREENP RFSMLTNHLK PNMAYPSYYP YCGISMSTVY 360 RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ 420 QISSSHNVYT ANKSCYGTPH SSFDLQPDEE LIDKIVTEAR RKPWSPLPLG LKPPSAESVL 480 KELSKQGVST VPPRINGSKP P

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MLHIAVYYCN DEKEALSAIM NTPENFHIAI LEMCKGNYGE SFKLLGSSKD LPIIMTSDVY  60
CLTTMMKCIA LGAVEFLLKP LSEDKLRNIW QHVLHKAFSS TPKPEVDSAA SLMQLQLESE  120
DNNGVLKDTE GLSWIQDIVW EQEQPDGSVK SQLNQGSSLQ GFWESGDQMN CPMETDCSDK  180
HVQSNFVETT SHDLVCEDTL QEGQPQLSGK VMDKEDENFA VGLNAESNVY QHLQNKYGVK  240
SSPSAAEQSI QGSDVNPSAS SKAKKTKVDW SPELHRKFIQ AVEQLGIDRA IPSKILELMK  300
VEGLTRHNVA SHLQKYRMQK KHAVHREENP RFSMLTNHLK PNMAYPSYYP YCGISMSTVY  360
RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ  420
QISSSHNVYT ANKSCYGTPH SSFDLQPDEE LIDKIVTEAR RKPWSPLPLG LKPPSAESVL  480
KELSKQGVST VPPRINGSKP P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	2e-79	ARR-B family protein