PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931037.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 471aa MW: 52794.6 Da PI: 6.6242

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931037.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7.1e-28	235	288	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022931037.1 235 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 288 6799***************.******************************8 PP
2	Myb_DNA-binding	42.4	1.6e-13	238	287	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022931037.1 238 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 287 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MLMCKGNYGE SFKLLGSSKD LPIIMTSDVY CLTTMMKCIA LGAVEFLLKP LSEDKLRNIW 60 QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNNGVLKDTE GLSWIQDIVW EQEQPDGSVK 120 SQLNQGSSLQ GFWESGDQMN CPMETDCSDK HVQSNFVETT SHDLVCEDTL QEGQPQLSGK 180 VMDKEDENFA VGLNAESNVY QHLQNKYGVK SSPSAAEQSI QGSDVNPSAS SKAKKTKVDW 240 SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP 300 RFSMLTNHLK PNMAYPSYYP YCGISMSTVY RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ 360 PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ QISSSHNVYT ANKSCYGTPH SSFDLQPDEE 420 LIDKIVTEAR RKPWSPLPLG LKPPSAESVL KELSKQGVST VPPRINGSKP P

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MLMCKGNYGE SFKLLGSSKD LPIIMTSDVY CLTTMMKCIA LGAVEFLLKP LSEDKLRNIW  60
QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNNGVLKDTE GLSWIQDIVW EQEQPDGSVK  120
SQLNQGSSLQ GFWESGDQMN CPMETDCSDK HVQSNFVETT SHDLVCEDTL QEGQPQLSGK  180
VMDKEDENFA VGLNAESNVY QHLQNKYGVK SSPSAAEQSI QGSDVNPSAS SKAKKTKVDW  240
SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP  300
RFSMLTNHLK PNMAYPSYYP YCGISMSTVY RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ  360
PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ QISSSHNVYT ANKSCYGTPH SSFDLQPDEE  420
LIDKIVTEAR RKPWSPLPLG LKPPSAESVL KELSKQGVST VPPRINGSKP P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	3e-68	ARR-B family protein