PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931039.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 433aa MW: 48618.6 Da PI: 6.5108

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931039.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.5	6.3e-28	197	250	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022931039.1 197 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 250 6799***************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	200	249	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022931039.1 200 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 249 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MLLGAVEFLL KPLSEDKLRN IWQHVLHKAF SSTPKPEVDS AASLMQLQLE SEDNNGVLKD 60 TEGLSWIQDI VWEQEQPDGS VKSQLNQGSS LQGFWESGDQ MNCPMETDCS DKHVQSNFVE 120 TTSHDLVCED TLQEGQPQLS GKVMDKEDEN FAVGLNAESN VYQHLQNKYG VKSSPSAAEQ 180 SIQGSDVNPS ASSKAKKTKV DWSPELHRKF IQAVEQLGID RAIPSKILEL MKVEGLTRHN 240 VASHLQKYRM QKKHAVHREE NPRFSMLTNH LKPNMAYPSY YPYCGISMST VYRTWTQNNG 300 QPANVNMWGP PDYRHWPQPG TQPWNSYAGM QADAWGCPVM LPSRAPYFSY PQQISSSHNV 360 YTANKSCYGT PHSSFDLQPD EELIDKIVTE ARRKPWSPLP LGLKPPSAES VLKELSKQGV 420 STVPPRINGS KPP

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MLLGAVEFLL KPLSEDKLRN IWQHVLHKAF SSTPKPEVDS AASLMQLQLE SEDNNGVLKD  60
TEGLSWIQDI VWEQEQPDGS VKSQLNQGSS LQGFWESGDQ MNCPMETDCS DKHVQSNFVE  120
TTSHDLVCED TLQEGQPQLS GKVMDKEDEN FAVGLNAESN VYQHLQNKYG VKSSPSAAEQ  180
SIQGSDVNPS ASSKAKKTKV DWSPELHRKF IQAVEQLGID RAIPSKILEL MKVEGLTRHN  240
VASHLQKYRM QKKHAVHREE NPRFSMLTNH LKPNMAYPSY YPYCGISMST VYRTWTQNNG  300
QPANVNMWGP PDYRHWPQPG TQPWNSYAGM QADAWGCPVM LPSRAPYFSY PQQISSSHNV  360
YTANKSCYGT PHSSFDLQPD EELIDKIVTE ARRKPWSPLP LGLKPPSAES VLKELSKQGV  420
STVPPRINGS KPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	3e-54	ARR-B family protein