PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931129.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 490aa MW: 53910.7 Da PI: 6.1546

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931129.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.5e-13	346	392	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_022931129.1 346 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 392 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MGEKFWANEE KRVLVESVVG SEACEFLMSL ASSNILAEDL QLSLGDFSVN QGLTKLLDAS 60 SWNYAIFWRV VSLKSGALAL IWGDGNCNDE KIGIAIPGGD GQGEKKEELK RQVLQMLQSS 120 FGGSDKDGYG ARRDEASDVE MLYLTSMHYK FMCDSGSSLG ESYKSGNSIW ASDVTSCLRN 180 YESRGFLGKM AGVQTLVFVP VKLGVVELGS VKSIPEDQGV VELVRAAFGG SNTAQLKTFP 240 RIFGHELSLG GTQPRSLSIN FSPKLEDDTN VSPEGFELQG LGANHVFGNS SNGGRSDDND 300 AKMFPHAQTR LSSLEFPRDE SSPKGDDRKP RKRGRKPANG REEPLNHVEA ERQRREKLNQ 360 RFYALRAVVP NISKMDKASL LGDAITYITD LQMKIKVMEA EKQIANGRQK SAEVDFQARE 420 EDAVVRVSCP LDSHPVSRVI KTFREHQIEA QESKVTTTSD NEKVIHSFSI RTEGGAAEQL 480 KEKLLAALSK

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MGEKFWANEE KRVLVESVVG SEACEFLMSL ASSNILAEDL QLSLGDFSVN QGLTKLLDAS  60
SWNYAIFWRV VSLKSGALAL IWGDGNCNDE KIGIAIPGGD GQGEKKEELK RQVLQMLQSS  120
FGGSDKDGYG ARRDEASDVE MLYLTSMHYK FMCDSGSSLG ESYKSGNSIW ASDVTSCLRN  180
YESRGFLGKM AGVQTLVFVP VKLGVVELGS VKSIPEDQGV VELVRAAFGG SNTAQLKTFP  240
RIFGHELSLG GTQPRSLSIN FSPKLEDDTN VSPEGFELQG LGANHVFGNS SNGGRSDDND  300
AKMFPHAQTR LSSLEFPRDE SSPKGDDRKP RKRGRKPANG REEPLNHVEA ERQRREKLNQ  360
RFYALRAVVP NISKMDKASL LGDAITYITD LQMKIKVMEA EKQIANGRQK SAEVDFQARE  420
EDAVVRVSCP LDSHPVSRVI KTFREHQIEA QESKVTTTSD NEKVIHSFSI RTEGGAAEQL  480
KEKLLAALSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	328	336	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-153	bHLH family protein